DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab4 and RABB1a

DIOPT Version :9

Sequence 1:	NP_523777.1	Gene:	Rab4 / 36992	FlyBaseID:	FBgn0016701	Length:	213	Species:	Drosophila melanogaster
Sequence 2:	NP_193449.1	Gene:	RABB1a / 827427	AraportID:	AT4G17160	Length:	205	Species:	Arabidopsis thaliana

Alignment Length:	201	Identity:	104/201 - (51%)
Similarity:	136/201 - (67%)	Gaps:	4/201 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQE 68
            :|.|.||::|||..|.||||||..|.:.:|:.....|||||||::.:.:..|.:|||||||||||
plant     2 SYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAGQE 66

  Fly    69 RFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTF 133
            .|||||||||||.||.|||||.|.|::||.|.:||.:||..||.|:..:|:|||.|||:.|.|:.
plant    67 SFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLEDKRTVST 131

  Fly   134 LEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGI---QYGGAALR 195
            .|...||:|:.|||:|.||||..||||||::.:.||..:|:.|.:| |....||   .:||....
plant   132 EEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVD-EANEPGITPGPFGGKDAS 195

  Fly   196 NLQTRQ 201
            :.|.|:
plant   196 SSQQRR 201

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	90/159 (57%)
RABB1a	NP_193449.1	PLN03108	1..204	CDD:178655	104/201 (52%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910