Protein Alignment Rab4 and RABA4D

DIOPT Version :9

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_187823.1
• Gene: RABA4D / 820393
• AraportID: AT3G12160
• Length: 222
• Species: Arabidopsis thaliana
• Alignment Length: 180
• Identity: 90/180 - (50%)
• Similarity: 114/180 - (63%)
• Gaps: 11/180 - (6%)

  Fly     1 MSETY-------DYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVK 58
            ||..|       ||:||.::||.:..||:.||..|..::|..||..||||||.::.:.:..|:||
plant     1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVK 65

  Fly    59 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKK 123
            .||||||||||:|:||.:|||||.||:||||.|.|.||:.:..||.:.|..|..||||:|:|||.
plant    66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKC 130

  Fly   124 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI 173
            ||...|.|...:|..|||...|.|:||||....|||.|||    |||.:|
plant   131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFL----TILTEI 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	81/159 (51%)
RABA4D	NP_187823.1	Rab11_like	13..177	CDD:206660	87/168 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910