DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and RAB7A

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_565521.1 Gene:RAB7A / 816724 AraportID:AT2G21880 Length:212 Species:Arabidopsis thaliana


Alignment Length:215 Identity:73/215 - (33%)
Similarity:110/215 - (51%) Gaps:22/215 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRS 72
            |.|.:::|.:|.||:.|::.::..||......|||.:|.::.:::..|||.||||||||||||:|
plant     9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQS 73

  Fly    73 VTRSYYRGAAGALLVYDATSRDSFNALTNW----LNDARTLASPNIVILLVGNKKDLE--EARDV 131
            :..::||||...:||||..:..||..|.||    |..|..:.......:|:|||.|::  .:|.|
plant    74 LGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDVDGGNSRVV 138

  Fly   132 TFLEASTF-AQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALR 195
            :...|..: ..:..:.:.|||||...|::||||..:...|:.        ||..|...|......
plant   139 SNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSN--------ERKQSNDIYPRGQYH 195

  Fly   196 NLQTRQRSINKPD----CTC 211
            :..|   .|..||    |.|
plant   196 DSVT---DIIDPDQSRGCAC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 61/166 (37%)
RAB7ANP_565521.1 Rab7 10..181 CDD:206655 62/178 (35%)

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