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Protein Alignment Rab4 and Rab11b
DIOPT Version :9
Sequence 1: | NP_523777.1 |
Gene: | Rab4 / 36992 |
FlyBaseID: | FBgn0016701 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_116006.1 |
Gene: | Rab11b / 79434 |
RGDID: | 68369 |
Length: | 218 |
Species: | Rattus norvegicus |
Alignment Length: | 171 |
Identity: | 90/171 - (52%) |
Similarity: | 114/171 - (66%) |
Gaps: | 4/171 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
:.||||||.::||.:|.|||.||..|..::|..:|..||||||.:|.:.|.||::|.||||||||
Rat 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Fly 68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
||:|::|.:|||||.|||||||.....::..:..||.:.|..|..||||:|||||.||...|.|.
Rat 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Fly 133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI 173
..||..||::|.|.|:||||....|||||| |.||.:|
Rat 136 TDEARAFAEKNNLSFIETSALDSTNVEEAF----KNILTEI 172
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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