Protein Alignment Rab4 and rab43

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001038812.1
• Gene: rab43 / 751627
• ZFINID: ZDB-GENE-060825-25
• Length: 208
• Species: Danio rerio
• Alignment Length: 190
• Identity: 77/190 - (40%)
• Similarity: 119/190 - (62%)
• Gaps: 2/190 - (1%)

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            ::||.:||.:::|..|.||:|::..|....|.:...:||||:|..:.:.:.||.|||||||||||
Zfish     8 DSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQIWDTAGQ 72

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||||::|:||||.|.||::.||.|.:.:|.::..|:.|.:.....|||.||:|||.||.|:|:|.
Zfish    73 ERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPLLIGNKCDLSESREVP 137

  Fly   133 FLEASTFAQENELI-FLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGG 191
            ..:|.|.|.:.:.: .:|||||...||:|||.|.:..::.: ..|.:..|.:....:..|
Zfish   138 LEDAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASELILR-HGGPMFTENVTDSFKLTG 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	72/160 (45%)
rab43	NP_001038812.1	P-loop containing Nucleoside Triphosphate Hydrolases	11..175	CDD:476819	73/163 (45%)