DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab2a

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_113906.2 Gene:Rab2a / 65158 RGDID:68323 Length:212 Species:Rattus norvegicus


Alignment Length:186 Identity:109/186 - (58%)
Similarity:135/186 - (72%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQER 69
            |.||||::|||..|.||||||..|.:.:|:.....|||||||:|::.:.||.:|||||||||||.
  Rat     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67

  Fly    70 FRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFL 134
            |||:||||||||||||||||.|.||:||.||.||.|||..::.|:||:|:|||.|||..|:|...
  Rat    68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKE 132

  Fly   135 EASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYG 190
            |...||:|:.|||:||||||..||||||:..:|.|..||:.|..|.....:||:.|
  Rat   133 EGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 98/159 (62%)
Rab2aNP_113906.2 PLN03108 1..188 CDD:178655 108/184 (59%)
Required for interaction with PRKCI. /evidence=ECO:0000250 2..19 9/15 (60%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..212
Blue background indicates that the domain is not in the aligned region.

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