DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and RAB17

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_016860182.1 Gene:RAB17 / 64284 HGNCID:16523 Length:338 Species:Homo sapiens


Alignment Length:168 Identity:65/168 - (38%)
Similarity:92/168 - (54%) Gaps:23/168 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRS 72
            :||.:::||...|||.|...::::.|| ....|:|..|.:::|:||..|:||:||||||||::.|
Human    19 VFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHS 82

  Fly    73 VTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASP-NIVILLVGNKKDLEEARDVTF--- 133
            |...|:|||..||||||.|.:|||.....||.|......| .::::|||||.||.:.|:|||   
Human    83 VCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQVP 147

  Fly   134 --LEASTFAQENELIFLETSAKTGENVEEAFLKCSKTI 169
              ...|...|:                |.|...|.||:
Human   148 PRRPCSALPQQ----------------ERALPACVKTL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 64/165 (39%)
RAB17XP_016860182.1 P-loop containing Nucleoside Triphosphate Hydrolases 20..>146 CDD:476819 58/126 (46%)

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