Protein Alignment Rab4 and rab5d

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001025576.1
• Gene: rab5d / 594964
• XenbaseID: XB-GENE-489496
• Length: 213
• Species: Xenopus tropicalis
• Alignment Length: 159
• Identity: 70/159 - (44%)
• Similarity: 101/159 - (63%)
• Gaps: 0/159 - (0%)

  Fly     9 FKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRSV 73
            ||.:::|....|||.|:..|::.:|.:....|||..|.::.|.:...:||.:|||||||||:.|:
 Frog    20 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSL 84

  Fly    74 TRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFLEAST 138
            ...|||||..|::|:|.|..::|:....|:.:.:..|||||||.|.|||.||.|.|.|.:.||..
 Frog    85 APMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEAQA 149

  Fly   139 FAQENELIFLETSAKTGENVEEAFLKCSK 167
            :|::..|:|:||||||..||.|.||..:|
 Frog   150 YAEDTGLLFMETSAKTAMNVNELFLAIAK 178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	70/159 (44%)
rab5d	NP_001025576.1	Rab5_related	19..181	CDD:206653	70/159 (44%)