DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and RAB13

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_002861.1 Gene:RAB13 / 5872 HGNCID:9762 Length:203 Species:Homo sapiens


Alignment Length:210 Identity:89/210 - (42%)
Similarity:124/210 - (59%) Gaps:23/210 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |::.||:|||.|:||.:|.||:||:..|.|..|.:....|||::|..|.|::.||.:|||:||||
Human     1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 65

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            |||||:::|.:|||||.|.:||||.|...||..:.||:...:..||..:..||:|||.|:|..|.
Human    66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRK 130

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALR 195
            |...:|...|:|:.:.|.|||||:..||:|||...::.||.|  :|   ..|.|:|         
Human   131 VQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK--SG---GRRSGNG--------- 181

  Fly   196 NLQTRQRSINKPDCT 210
                     |||..|
Human   182 ---------NKPPST 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 74/159 (47%)
RAB13NP_002861.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 78/165 (47%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 11/16 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 8/36 (22%)

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