DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and RAB25

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_065120.2 Gene:RAB25 / 57111 HGNCID:18238 Length:213 Species:Homo sapiens


Alignment Length:171 Identity:85/171 - (49%)
Similarity:113/171 - (66%) Gaps:0/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |.|:::||.::||.:|.||:.||..|..::|..||..||||||.:|.|.:|..:||.|||||||.
Human     7 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 71

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||:|::|.:|||||.|||||:|.|...::..:..||.:....|...||::|||||.||.:||:|.
Human    72 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136

  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI 173
            ..||..||:.|.|:||||||....|||.||....|.|.||:
Human   137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 80/159 (50%)
RAB25NP_065120.2 Rab11_like 11..174 CDD:206660 80/162 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 35..49 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 67..84 10/16 (63%)

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