DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and rab31

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_697248.2 Gene:rab31 / 568800 ZFINID:ZDB-GENE-140106-13 Length:194 Species:Danio rerio


Alignment Length:160 Identity:68/160 - (42%)
Similarity:95/160 - (59%) Gaps:0/160 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRSVT 74
            |..::|..|.|||.::..|::..|..:.|.|||..|.::.|..|.:..|..||||||||||.|:.
Zfish     7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQERFHSLA 71

  Fly    75 RSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFLEASTF 139
            ..||||:|.|::|||.|..|||..|..|:.:.:.....:||:.:.|||.||.:.|:|...||..|
Zfish    72 PMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPTKEAKEF 136

  Fly   140 AQENELIFLETSAKTGENVEEAFLKCSKTI 169
            |:....||:||||:...|:||.|.|.|:.|
Zfish   137 AESIAAIFMETSARNAVNIEELFQKISRQI 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 67/158 (42%)
rab31XP_697248.2 Rab5_related 5..167 CDD:206653 68/160 (43%)

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