Protein Alignment Rab4 and rab39bb

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001073492.1
• Gene: rab39bb / 566010
• ZFINID: ZDB-GENE-061215-104
• Length: 213
• Species: Danio rerio
• Alignment Length: 215
• Identity: 90/215 - (41%)
• Similarity: 130/215 - (60%)
• Gaps: 6/215 - (2%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNV-GGKSVKLQIWDT 64
            |...:.|.|:.::||.:..|||||:..|.|.:|...|..|:||:|.||:|.: .||.:|||||||
Zfish     1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDT 65

  Fly    65 AGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASP-NIVILLVGNKKDLEEA 128
            ||||||||:||:|||.:.|.||::|.|:|.||..:..||.:||:...| :||.||||:|.|||..
Zfish    66 AGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLLVGHKCDLEPQ 130

  Fly   129 RDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAA 193
            |.|:..||...|....:.::||||:...|||.||.:.::.|...::.||:..:....|::.|  .
Zfish   131 RQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVKNGEISIQEGWEGVKSG--F 193

  Fly   194 LRNLQTRQRSINKPD--CTC 211
            :.|:......:.|.|  |.|
Zfish   194 VPNVVHSSEEVTKGDRRCFC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	78/161 (48%)
rab39bb	NP_001073492.1	Rab39	7..213	CDD:133311	88/207 (43%)