DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and rab19

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_073798761.1 Gene:rab19 / 555645 -ID:- Length:271 Species:Danio rerio


Alignment Length:224 Identity:80/224 - (35%)
Similarity:128/224 - (57%) Gaps:31/224 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |..|:|||.::||.:..||:|::..|..::..:...:||||:|..|.::|.|:.||:|:||||||
Zfish    64 ERCDFLFKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSIDVDGRRVKMQVWDTAGQ 128

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||||::|:||||.|.||::.||.:.||:|::|.:|:.......:.::|::|:|||.|||..|.|.
Zfish   129 ERFRTITQSYYRSAHGAMIAYDLSRRDTFDSLPHWIQALEQYGAASLVLVLIGNKCDLEAQRQVL 193

  Fly   133 FLEASTFAQEN-ELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALRN 196
            |.:|.|.|:.: .|..||||||...|:||||...::.:|                :::||...::
Zfish   194 FEDACTLAERSGALAALETSAKHHHNIEEAFQLMARELL----------------VRHGGIHYQD 242

  Fly   197 LQT--------------RQRSINKPDCTC 211
            .|:              ....:.|..|.|
Zfish   243 NQSDSPTVYLHSDSHPIEGEQLEKRSCDC 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 70/160 (44%)
rab19XP_073798761.1 None

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