DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and rab12

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001018466.1 Gene:rab12 / 553657 ZFINID:ZDB-GENE-050522-555 Length:235 Species:Danio rerio


Alignment Length:169 Identity:75/169 - (44%)
Similarity:104/169 - (61%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERF 70
            ||..:.:||||.|.||:.|:..|.:..|.:....|:||:|..:.|.:.||.::||||||||||||
Zfish    33 DYKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 97

  Fly    71 RSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFLE 135
            .|:|.:|||||.|.:||||.|.:::|..|..|:......||.:..:||||||.|.|..|.::..:
Zfish    98 NSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCESDRAISRQQ 162

  Fly   136 ASTFAQE-NELIFLETSAKTGENVEEAFLKCSKTILAKI 173
            |..||.. :.:.|.|.|||...||:|.|||....||:|:
Zfish   163 AERFASRISGMRFCEASAKDNFNVDEIFLKLVDDILSKM 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 70/160 (44%)
rab12NP_001018466.1 Rab12 36..235 CDD:206699 73/166 (44%)

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