Protein Alignment Rab4 and Rab43

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001019502.1
• Gene: Rab43 / 500249
• RGDID: 1565300
• Length: 210
• Species: Rattus norvegicus
• Alignment Length: 216
• Identity: 84/216 - (38%)
• Similarity: 123/216 - (56%)
• Gaps: 23/216 - (10%)

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |.||:|||.:::|.|..||:|::..|....|......||||:|..:.:.:.||.|||||||||||
  Rat    11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ 75

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||||::|:||||.|.||:|.||.:.|.:|.::.:|:.|.|..|..|||.||:|||.||.:.|:|.
  Rat    76 ERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVP 140

  Fly   133 FLEASTFAQENELI-FLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALRN 196
            ..||.:.|:..::: .:|||||...||||||.:.:..::                :::||.....
  Rat   141 LAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI----------------MRHGGPMFSE 189

  Fly   197 LQTRQRSINKPD------CTC 211
            ..|....::..|      |.|
  Rat   190 KNTDHIQLDSKDIAESWGCGC 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	74/160 (46%)
Rab43	NP_001019502.1	Rab19	14..178	CDD:133267	76/163 (47%)
		Effector region. /evidence=ECO:0000250	45..53		4/7 (57%)