Protein Alignment Rab4 and rab4b

DIOPT Version :9

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001004002.1
• Gene: rab4b / 445498
• ZFINID: ZDB-GENE-040822-15
• Length: 213
• Species: Danio rerio
• Alignment Length: 213
• Identity: 167/213 - (78%)
• Similarity: 190/213 - (89%)
• Gaps: 2/213 - (0%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            ||||||:|||||:|||||:|||||||.|||:|||.||:||||||||||:||||||:|||||||||
Zfish     1 MSETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 65

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            ||||||||||||||||||||||||.|||:::|||||||.||||||||||||:|.||||||:..|:
Zfish    66 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADRE 130

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALR 195
            |||||||.|||||||:||||||.||||||||||||:::|..|||:|||||||:|||||||.|:||
Zfish   131 VTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIPNKIESGELDPERMGSGIQYGDASLR 195

  Fly   196 NLQTRQRSI--NKPDCTC 211
            .::..:.|.  .|..|.|
Zfish   196 QIRQPRGSAAQTKQQCNC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	135/159 (85%)
rab4b	NP_001004002.1	RAB	9..172	CDD:197555	136/162 (84%)
		Rab4	9..169	CDD:206696	135/159 (85%)
		Effector region. /evidence=ECO:0000250	37..45		6/7 (86%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170593196
Domainoid	1	1.000	277	1.000	Domainoid score	I1696
eggNOG	1	0.900	-	-		E2759_KOG0086
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H100632
Inparanoid	1	1.050	337	1.000	Inparanoid score	I2359
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1146851at2759
OrthoFinder	1	1.000	-	-		FOG0001311
OrthoInspector	1	1.000	-	-		otm26014
orthoMCL	1	0.900	-	-		OOG6_102241
Panther	1	1.100	-	-	LDO	PTHR47979
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X808
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	14	13.760