DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and rab30

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_068069614.2 Gene:rab30 / 437023 ZFINID:ZDB-GENE-040718-250 Length:216 Species:Danio rerio


Alignment Length:136 Identity:64/136 - (47%)
Similarity:86/136 - (63%) Gaps:4/136 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |.||||||.::||:||.||:||:..|.:..|......||||:|..:.|.:.|..|||||||||||
Zfish     2 EDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAGQ 66

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVG----NKKDLEEA 128
            |||||:|:||||.|...:|.||.|..|||..|..||.:....|:..:|.:|||    :|...::|
Zfish    67 ERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGGHGKHKSVSQQA 131

  Fly   129 RDVTFL 134
            ..:::|
Zfish   132 HAISYL 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 59/130 (45%)
rab30XP_068069614.2 None

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