Protein Alignment Rab4 and rab42a

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_998207.1
• Gene: rab42a / 406315
• ZFINID: ZDB-GENE-040426-1983
• Length: 213
• Species: Danio rerio
• Alignment Length: 213
• Identity: 76/213 - (35%)
• Similarity: 120/213 - (56%)
• Gaps: 2/213 - (0%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNV-GGKSVKLQIWDT 64
            |...:.|.|:.:::|.:..|||.||..|.:..:.|.:..|:||:|.:|.::: .|..:|||:|||
Zfish     1 MDTLWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSIDIEPGVKIKLQLWDT 65

  Fly    65 AGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASP-NIVILLVGNKKDLEEA 128
            ||||||||:|.||||.:.|.|||:|.|:|.:|:.:..|..:......| ::|.:|:|:|.||...
Zfish    66 AGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHREVSEHILPHHMVYILIGHKSDLSRD 130

  Fly   129 RDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAA 193
            |.||..||...|.:..:.::|||||...|||.||...::.|...::.||:.......|::.|..|
Zfish   131 RKVTRDEAEQLAADLGIRYVETSAKCNSNVERAFELLTRDIYELMKMGEISTRDGWDGVKSGLTA 195

  Fly   194 LRNLQTRQRSINKPDCTC 211
            .......:.:..:..|.|
Zfish   196 KVLYPAEEEAEREKSCNC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	66/161 (41%)
rab42a	NP_998207.1	Rab39	7..213	CDD:133311	74/205 (36%)