DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and RAB19

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001008749.2 Gene:RAB19 / 401409 HGNCID:19982 Length:217 Species:Homo sapiens


Alignment Length:217 Identity:87/217 - (40%)
Similarity:131/217 - (60%) Gaps:19/217 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |.:|||||.::||.:..||:|::.||....:.:...:||||:|..|.:::.||.||:|:||||||
Human    12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||||::|:||||.|..|::.||.|.|.:|.::.:|:::.....:.|:||:|:|||.||.|.|.|.
Human    77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVL 141

  Fly   133 FLEASTFAQENELI-FLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALRN 196
            |.:|.|.|::..|: .||||||..:|:||.|:..:|.::|:           .|...||.:||..
Human   142 FEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR-----------NSLHLYGESALNG 195

  Fly   197 LQ-------TRQRSINKPDCTC 211
            |.       ..|....|..|||
Human   196 LPLDSSPVLMAQGPSEKTHCTC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 71/160 (44%)
RAB19NP_001008749.2 Rab19 15..179 CDD:133267 74/163 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 4/14 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 11/14 (79%)

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