DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab32

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster


Alignment Length:191 Identity:64/191 - (33%)
Similarity:103/191 - (53%) Gaps:16/191 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKS-VKLQIWDTA 65
            |:..::|:|.|:||..|:||:..:..::...|..:...||||:|..:::.....: |:||:||.|
  Fly   477 SDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIA 541

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTL-----ASPNIVILLVGNKKDL 125
            |||||.::||.||:.|.||.:|:|.|...:|:.::.|..|..:.     .|| |..:|:.||.|.
  Fly   542 GQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP-IPCILLANKCDQ 605

  Fly   126 EEARDVTFLE-ASTFAQENELI-FLETSAKTGENVEEA-------FLKCSKTILAKIETGE 177
            |:...:|..| ...:.:||... :.|||||...|::||       .|...|.|.|.:..|:
  Fly   606 EKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKLISADLADGD 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 59/174 (34%)
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 1/3 (33%)
Rab32_Rab38 484..686 CDD:206692 62/184 (34%)

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