DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab10

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:184 Identity:79/184 - (42%)
Similarity:116/184 - (63%) Gaps:4/184 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            :|||.|||.|:||.:|.||:|:|..|.:..|......|||::|..:.|.:.||.:||||||||||
  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            |||.::|.||||||.|.:||||.|:..||..:..||.:....|:.::..:::|||.|:.:.|.|.
  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133

  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI---ETGELDPERI 183
            .......|:|:.:.|:|||||:..|:|.||.:.::.||.|.   |:.| :.||:
  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAE-NQERV 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 68/159 (43%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 72/165 (44%)

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