DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab26

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_796349.1 Gene:Rab26 / 328778 MGIID:2443284 Length:260 Species:Mus musculus


Alignment Length:192 Identity:78/192 - (40%)
Similarity:118/192 - (61%) Gaps:9/192 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDS-SHTIGVEFGSRIVNVGGKSVKLQIWDTAGQE 68
            ||..||.:::|.:|.||:|||..|.:..|...: ..|:|::|.:::::|.|..||||||||||||
Mouse    64 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQE 128

  Fly    69 RFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTF 133
            ||||||.:|||.|...||:||.|::|||:.:..||.:.:..|..::|::|:|||.|..:.|.|..
Mouse   129 RFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKR 193

  Fly   134 LEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDP--------ERIGSGI 187
            .:....|:|..|.|:||||:||.||:.||...:|.:..:......:|        :|.|.|:
Mouse   194 EDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFRLHDYVKREGRGV 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 72/160 (45%)
Rab26NP_796349.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Rab26 68..258 CDD:206695 76/188 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 90..105 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 123..140 14/16 (88%)
Blue background indicates that the domain is not in the aligned region.

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