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Protein Alignment Rab4 and Rab9Fa
DIOPT Version :9
Sequence 1: | NP_523777.1 |
Gene: | Rab4 / 36992 |
FlyBaseID: | FBgn0016701 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_727471.1 |
Gene: | Rab9Fa / 326230 |
FlyBaseID: | FBgn0052671 |
Length: | 197 |
Species: | Drosophila melanogaster |
Alignment Length: | 170 |
Identity: | 64/170 - (37%) |
Similarity: | 91/170 - (53%) |
Gaps: | 15/170 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIG-------VEFGS-RIVNVGGKSV 57
||: ||..||.:|:|.:|.||:|||..|.:::|......|:| |||.. |:..:
Fly 1 MSQ-YDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRM----- 59
Fly 58 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNK 122
||:|||:..|||:.:..:..|.|.|.|||||.||..||..:..|:.:.|.|....:.:||||||
Fly 60 -LQVWDTSDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNK 123
Fly 123 KDLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAF 162
.|....|.|:..:...:|....:.|.|.|||:|.||.:.|
Fly 124 SDDPNHRQVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIF 163
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45454396 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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