Protein Alignment Rab4 and Rab39a

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001101618.1
• Gene: Rab39a / 315668
• RGDID: 1311286
• Length: 217
• Species: Rattus norvegicus
• Alignment Length: 219
• Identity: 87/219 - (39%)
• Similarity: 131/219 - (59%)
• Gaps: 10/219 - (4%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSS----HTIGVEFGSRIVNV-GGKSVKLQ 60
            |...:.|.|:.::||.:..|||||||.|.:.:|....|    .|:||:|.||::.: .||.:|||
  Rat     1 MEAIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQ 65

  Fly    61 IWDTAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASP-NIVILLVGNKKD 124
            :|||||||||||:||||||.:.|..||:|.|:|.||..:.:||.:|:....| .||.||||:|.|
  Rat    66 LWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCD 130

  Fly   125 LEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQY 189
            |...|.|:..||...:::..:.::|||||...||||:|...::.|...|:.|::..:....|::
  Rat   131 LASQRQVSREEAEKLSKDCGMKYIETSAKDATNVEESFTILARDIYELIKKGDICIQDGWEGVK- 194

  Fly   190 GGAALRNLQTRQRSINKP--DCTC 211
            .|.....:.:.:.:: ||  .|.|
  Rat   195 SGFVPNTVHSSEEAV-KPRKQCFC 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	76/165 (46%)
Rab39a	NP_001101618.1	Rab39	7..217	CDD:133311	85/211 (40%)