Protein Alignment Rab4 and ypt3

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001342809.1
• Gene: ypt3 / 2542219
• PomBaseID: SPAC18G6.03
• Length: 214
• Species: Schizosaccharomyces pombe
• Alignment Length: 213
• Identity: 96/213 - (45%)
• Similarity: 126/213 - (59%)
• Gaps: 20/213 - (9%)

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            :.||||||.::||.:|.|||.||..|..::|..:|..||||||.:|.:.:..|.:|.||||||||
pombe     5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQ 69

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||:|::|.:|||||.|||:|||.|.:.||:.:..||.:.|..|..||||:|||||.||...|.|:
pombe    70 ERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVS 134

  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI---------ETGELDPERIGSGIQ 188
            ..||..||.||.|.|:||||....||||||    :|:|.:|         |.|:       .|:.
pombe   135 TEEAQAFAAENNLSFIETSAMDASNVEEAF----QTVLTEIFRIVSNRSLEAGD-------DGVH 188

  Fly   189 YGGAALRNLQTRQRSINK 206
            .......|:......:||
pombe   189 PTAGQTLNIAPTMNDLNK 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	83/159 (52%)
ypt3	NP_001342809.1	Rab11_like	8..172	CDD:206660	88/167 (53%)