Protein Alignment Rab4 and ypt4

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_594796.1
• Gene: ypt4 / 2542113
• PomBaseID: SPAC1B3.11C
• Length: 234
• Species: Schizosaccharomyces pombe
• Alignment Length: 198
• Identity: 102/198 - (51%)
• Similarity: 140/198 - (70%)
• Gaps: 5/198 - (2%)

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVG----GKSVKLQIWD 63
            |:||||.|.::.|.:|:||||||..|:::::.|..|||:|::|.|||::||    .|.:||||||
pombe     4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWD 68

  Fly    64 TAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEA 128
            |||||:||||.|:||||||||:||||.|::|||..|::||:|.|.:|...|.::|.|:|.||:..
pombe    69 TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQ 133

  Fly   129 RDVTFLEASTFAQENELIFL-ETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGA 192
            |.|:..||:.|..|..:... |||:.||.||||.||....||:.:||.||:||:....|||||..
pombe   134 RQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIELGEIDPQDQSLGIQYGDL 198

  Fly   193 ALR 195
            :.|
pombe   199 SFR 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	83/164 (51%)
ypt4	NP_594796.1	RAB	10..178	CDD:197555	85/167 (51%)