DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab7

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_033031.2 Gene:Rab7 / 19349 MGIID:105068 Length:207 Species:Mus musculus


Alignment Length:219 Identity:72/219 - (32%)
Similarity:115/219 - (52%) Gaps:20/219 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |:.....|.|.:|:|.:|.||:.|::.::..||.:....|||.:|.::.|.|..:.|.:||||||
Mouse     1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASP----NIVILLVGNKKDLE 126
            |||||:|:..::||||...:||:|.|:.::|..|.:|.::....|||    |...:::|||.|||
Mouse    66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130

  Fly   127 EARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTIL---AKIETGELDPERIGSGIQ 188
            ..:..|....:....:|.:.:.|||||...|||:||...::..|   .::|.....||.|     
Mouse   131 NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPI----- 190

  Fly   189 YGGAALRNLQTRQRS-INKPDCTC 211
                   .|....|: .:...|:|
Mouse   191 -------KLDKNDRAKASAESCSC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 61/163 (37%)
Rab7NP_033031.2 Rab7 9..179 CDD:206655 62/169 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51149 28..41 2/12 (17%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51149 67..82 8/14 (57%)

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