DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab19

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_035356.1 Gene:Rab19 / 19331 MGIID:103292 Length:217 Species:Mus musculus


Alignment Length:210 Identity:83/210 - (39%)
Similarity:129/210 - (61%) Gaps:5/210 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |..|||||.::||.:..||:|::.||....:.:...:||||:|..|.:.:.||.||:|:||||||
Mouse    12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||||::|:||||.|..|::.||.|.|.:|.::.:|:::.....:.|:||:|:|||.||.|.|.|.
Mouse    77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVL 141

  Fly   133 FLEASTFAQENELI-FLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALRN 196
            |.:|.|.|:::.|: .||||||...|::|.|:..:|.::|: .:..|..|....|:....:.:..
Mouse   142 FEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIAR-NSLHLYGESAQQGLSQDSSPVLV 205

  Fly   197 LQTRQRSINKPDCTC 211
            .|....|..   |||
Mouse   206 AQVPNESTR---CTC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 70/160 (44%)
Rab19NP_035356.1 Rab19 15..179 CDD:133267 73/163 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 4/14 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 11/14 (79%)

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