Protein Alignment Rab4 and Rab1a

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_033022.1
• Gene: Rab1a / 19324
• MGIID: 97842
• Length: 205
• Species: Mus musculus
• Alignment Length: 211
• Identity: 94/211 - (44%)
• Similarity: 130/211 - (61%)
• Gaps: 10/211 - (4%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |:..||||||.|:||.:|.||||||..|.:..:.:....||||:|..|.:.:.||::||||||||
Mouse     4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            ||||||::|.||||||.|.::|||.|.::|||.:..||.:....||.|:..||||||.||...:.
Mouse    69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKV 133

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALR 195
            |.:..|..||....:.|||||||...|||::|:    |:.|:|:      :|:|.|...|||...
Mouse   134 VDYTTAKEFADSLGIPFLETSAKNATNVEQSFM----TMAAEIK------KRMGPGATAGGAEKS 188

  Fly   196 NLQTRQRSINKPDCTC 211
            |::.:...:.:....|
Mouse   189 NVKIQSTPVKQSGGGC 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	78/159 (49%)
Rab1a	NP_033022.1	Rab1_Ypt1	10..175	CDD:206661	83/174 (48%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P62820	34..48		4/13 (31%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P62820	66..83		13/16 (81%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..205		6/27 (22%)