Protein Alignment Rab4 and rab-39

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_495984.2
• Gene: rab-39 / 183941
• WormBaseID: WBGene00004286
• Length: 229
• Species: Caenorhabditis elegans
• Alignment Length: 216
• Identity: 83/216 - (38%)
• Similarity: 132/216 - (61%)
• Gaps: 9/216 - (4%)

  Fly     5 YDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNV-GGKSVKLQIWDTAGQE 68
            :.|.::.::||.:..|||.||.:|.|.|..:.|..|:||:|.:|::.: .|..||||:|||||||
 Worm    14 FHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQE 78

  Fly    69 RFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDAR-TLASPN---IVILLVGNKKDLEEAR 129
            :|||:|:||||.:.|.|.:||.|:|:||..:.||:.:|. .|..|:   .|..|||.|.|::..|
 Worm    79 KFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQR 143

  Fly   130 DVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAAL 194
            .|.:.|...||:.:::.|:|||::||:||.|||...::.|..:::.|||.|.....|::.|....
 Worm   144 QVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEIQNRVDDGELRPVDGWEGLKTGIMRS 208

  Fly   195 RNLQTRQRSINKPD----CTC 211
            :::...:||..:..    |.|
 Worm   209 QSVCLSERSFPQNSSAGACGC 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	71/164 (43%)
rab-39	NP_495984.2	Rab39	16..229	CDD:133311	82/212 (39%)