Protein Alignment Rab4 and rab-1

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_503397.1
• Gene: rab-1 / 178620
• WormBaseID: WBGene00004266
• Length: 205
• Species: Caenorhabditis elegans
• Alignment Length: 192
• Identity: 90/192 - (46%)
• Similarity: 122/192 - (63%)
• Gaps: 10/192 - (5%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |:..||||||.|:||.:|.||||||..|.:..:.:....||||:|..|.:.:.||::||||||||
 Worm     4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            ||||||::|.||||||.|.::|||.|.:::||.:..||.:....|..|:..||||||.||...|.
 Worm    69 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRA 133

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGA 192
            |....|..:|.:..:.|||||||:..|||:|||    |:.::|::      |:|.....|||
 Worm   134 VETQAAQDYAGQLGIPFLETSAKSSTNVEQAFL----TMASEIKS------RMGPVQGAGGA 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	78/159 (49%)
rab-1	NP_503397.1	Rab1_Ypt1	10..175	CDD:206661	82/174 (47%)