Protein Alignment Rab4 and rab-3

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001021973.1
• Gene: rab-3 / 173971
• WormBaseID: WBGene00004267
• Length: 233
• Species: Caenorhabditis elegans
• Alignment Length: 210
• Identity: 80/210 - (38%)
• Similarity: 122/210 - (58%)
• Gaps: 8/210 - (3%)

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            :.:||:||.||||::..||:..|..:.:..|......|:|::|..:.|..|.|.|||||||||||
 Worm    31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQ 95

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||:|::|.:|||||.|.:|:||.|:.:|||::.:|....:|.:..|..::|||||.|::..|.|:
 Worm    96 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVS 160

  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI-ETGELDPERIGSGIQYGGAALRN 196
            .......|.:..|.|.|||||...||:..|.|..:.|..|: |:.:.||::     |..|..|..
 Worm   161 MDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQ-----QPKGQKLEA 220

  Fly   197 LQTRQRSINKPDCTC 211
            ..|::.:  :..|.|
 Worm   221 NPTQKPA--QQQCNC 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	67/159 (42%)
rab-3	NP_001021973.1	Rab3	36..200	CDD:206657	68/163 (42%)