DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab9

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_318959.4 Gene:Rab9 / 1279264 VectorBaseID:AGAMI1_007884 Length:233 Species:Anopheles gambiae


Alignment Length:160 Identity:70/160 - (43%)
Similarity:95/160 - (59%) Gaps:5/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRS 72
            |.|.:|:|....|||||::.|:.:.|..:|.|||||||.::.:.|..:...|||||||||||||:
Mosquito    12 LLKVVILGDGNVGKSCLMNRFVSNYFDANSFHTIGVEFLNKDIQVDQERFTLQIWDTAGQERFRA 76

  Fly    73 VTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPN---IVILLVGNKKDLEEA-RDVTF 133
            :...:|||....||.|....|.||.||.:|.::.......|   ...::||.|.||..| |:||.
Mosquito    77 LRTPFYRGTDICLLTYAINDRLSFRALASWRDEFLRYYDVNPDHFPFVVVGTKNDLPPAQREVTA 141

  Fly   134 LEASTFAQENEL-IFLETSAKTGENVEEAF 162
            .|.|.:.||:.: .::||||||.|||..||
Mosquito   142 EEVSQWCQEHHITAYIETSAKTSENVATAF 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 69/159 (43%)
Rab9XP_318959.4 None

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