DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab14

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_555021.4 Gene:Rab14 / 1277558 VectorBaseID:AGAMI1_000989 Length:239 Species:Anopheles gambiae


Alignment Length:213 Identity:117/213 - (54%)
Similarity:147/213 - (69%) Gaps:11/213 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQER 69
            |.|:||::|||..|.|||||||.|.|.||.....||||||||:||:.|..:.:||||||||||||
Mosquito    32 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWDTAGQER 96

  Fly    70 FRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFL 134
            ||:|||||||||||||:|||.|.|.::|.|::||.|.|.|.:|:.||.|:|||.|||..|:||:.
Mosquito    97 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYE 161

  Fly   135 EASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQY-----GGAAL 194
            ||..||.|:.|:|.|.||.||:|||||||:.::.|...|:.|.||.....:|:|:     |...|
Mosquito   162 EAKNFADEHGLLFAEASAMTGQNVEEAFLETARKIYQSIKDGRLDLNSSETGVQHKPAQPGRTTL 226

  Fly   195 RN-LQTRQRSINKPDCTC 211
            .| .||     ||.:|:|
Mosquito   227 SNDAQT-----NKENCSC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 99/159 (62%)
Rab14XP_555021.4 None

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