DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab1

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_061497112.1 Gene:Rab1 / 1273973 VectorBaseID:AGAMI1_003967 Length:201 Species:Anopheles gambiae


Alignment Length:184 Identity:88/184 - (47%)
Similarity:116/184 - (63%) Gaps:10/184 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            ||..||||||.|:||.:|.||||||..|.:..:.:....||||:|..|.:::.||::||||||||
Mosquito     1 MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 65

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            ||||||::|.||||||.|.::|||.|..|||..:..||.:....|..|:..||||||.||:..:.
Mosquito    66 GQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKCDLQTKKR 130

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIG 184
            |....|...|.:..:.|||||||...|||:||:    |:.|:|:      .|:|
Mosquito   131 VDTTTAMELANQLGIPFLETSAKNATNVEQAFM----TMAAEIK------NRVG 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 77/159 (48%)
Rab1XP_061497112.1 None

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