DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab18

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_309827.5 Gene:Rab18 / 1271081 VectorBaseID:AGAMI1_001194 Length:203 Species:Anopheles gambiae


Alignment Length:204 Identity:82/204 - (40%)
Similarity:124/204 - (60%) Gaps:11/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRSV 73
            ||.||||.:|.|||.|:..|.|:.|..|.:.||||:|.::::::.|..|||.|||||||||||::
Mosquito    10 FKILIIGESGVGKSSLMLRFTENDFDSDQALTIGVDFKTKMLDLDGVKVKLAIWDTAGQERFRTL 74

  Fly    74 TRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLAS-PNIVILLVGNKKDLEEARDVTFLEAS 137
            |.||||.|.||:||||.|..|:|..|.:|||:.....: .|:..::||||.| ...|.:...|..
Mosquito    75 TPSYYRDAQGAILVYDVTKPDTFQKLESWLNELEIYGTRNNMAKMVVGNKID-HPNRAIGREEGF 138

  Fly   138 TFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALRNLQTRQR 202
            .||:::.::|:||||||.|.|::||    :.::.||    ::.:.:.....||...: :|...:.
Mosquito   139 RFAKKHRMMFIETSAKTSEGVKDAF----EEVVRKI----METDGLWERNDYGDGGV-DLHGNRA 194

  Fly   203 SINKPDCTC 211
            :.....|:|
Mosquito   195 AGAAGSCSC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 75/160 (47%)
Rab18XP_309827.5 None

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