DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab4 and Rab31

DIOPT Version :10

Sequence 1:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_598446.2 Gene:Rab31 / 106572 MGIID:1914603 Length:195 Species:Mus musculus


Alignment Length:188 Identity:73/188 - (38%)
Similarity:107/188 - (56%) Gaps:8/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRSVT 74
            |..::|..|.|||.::..|::..|..:.|.|||..|.::.|..|.:..|..||||||||||.|:.
Mouse     8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA 72

  Fly    75 RSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFLEASTF 139
            ..||||:|.|::|||.|.:|||:.|..|:.:.:.....|||:.:.|||.||.:.|:|...:|..:
Mouse    73 PMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEY 137

  Fly   140 AQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGS--GIQYGGAALR 195
            |:....|.:|||||...|:||.|...|:.|      ..|.|:..|:  ||:.|..:|:
Mouse   138 AESIGAIVVETSAKNAINIEELFQGISRQI------PPLGPQENGNSGGIKLGNQSLQ 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab4NP_523777.1 Rab4 9..169 CDD:206696 65/158 (41%)
Rab31NP_598446.2 Rab5_related 6..168 CDD:206653 66/165 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 30..42 5/11 (45%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 63..79 10/15 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..195 7/22 (32%)

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