DRSC/TRiP Functional Genomics Resources

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Protein Alignment POSH and EndoA

DIOPT Version :10

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_620122.2 Gene:EndoA / 42265 FlyBaseID:FBgn0038659 Length:369 Species:Drosophila melanogaster


Alignment Length:186 Identity:51/186 - (27%)
Similarity:81/186 - (43%) Gaps:35/186 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LERLDTTSKVLPCQHTFCRKCLQDIVASQHKLRCPECRILVSCKIDELPPNVLLMRILEGMKQNA 80
            :.:|.|.::.|...|:.|...|:.:..:..:.|         .:.:..|.|..:.:.|..:..:.
  Fly   211 VSQLVTFAEALYDFHSQCADVLRGLQETLQEKR---------SEAESRPRNEFVPKTLLDLNLDG 266

  Fly    81 AAGKGEEKGEETETQPERAKPQP-----PAESVAPPDNQLLQLQSHQQSHQPARHKQRRFLLPHA 140
            ..|...|.|..:... ..|.|.|     ||:|:|.               .|.|.:|     |..
  Fly   267 GGGGLNEDGTPSHIS-SSASPLPSPMRSPAKSMAV---------------TPQRQQQ-----PCC 310

  Fly   141 YALFDFASGEATDLKFKKGDLILIKHRIDNNWFVGQANGQEGTFPINYVKVSVPLP 196
            .||:||......:|.||:.|:|.:.:|:|:|||.|..||:.|.||.:||:|.||||
  Fly   311 QALYDFEPENPGELAFKENDIITLLNRVDDNWFEGAVNGRTGYFPQSYVQVQVPLP 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RAD18 6..>113 CDD:227719 20/101 (20%)
RING-HC_SH3RF3 8..53 CDD:438408 7/36 (19%)
SH3 139..191 CDD:473055 22/51 (43%)
SH3_SH3RF_2 199..251 CDD:212721
SH3_SH3RF_3 424..477 CDD:212717
SH3_SH3RF_C 782..836 CDD:212719
EndoANP_620122.2 BAR_Endophilin_A 25..246 CDD:153276 7/43 (16%)
SH3_Endophilin_A 312..361 CDD:212737 22/48 (46%)
Blue background indicates that the domain is not in the aligned region.

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