DRSC/TRiP Functional Genomics Resources

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Protein Alignment POSH and Exn

DIOPT Version :10

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster


Alignment Length:557 Identity:113/557 - (20%)
Similarity:184/557 - (33%) Gaps:187/557 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LMRILEGMKQNAAAGKGEEKGEETETQPE-RAKPQPPAESVAPPDNQ-----------------L 115
            |..|...::.:.::...||.|.:.:.:|| ..||:|.|..:..|.|.                 |
  Fly  1502 LESITRDLEAHGSSDGYEEIGLQAKAKPEPLVKPRPTALQLVEPKNGPSRTLWSEIPEVIHSCIL 1566

  Fly   116 LQLQSHQQSHQPARHKQRRFLLPHAYALFDFASGEATDLKFKKGDLILIKHRIDNNWF----VGQ 176
            ..|.|.::|.|.|:              |:..:.||:.||...   :|.:|.:::|.|    |..
  Fly  1567 PTLTSRERSLQEAK--------------FEIITSEASYLKSLN---LLRRHFMNHNAFLDSSVLS 1614

  Fly   177 ANGQEGTFPINYVKVSVPLPMPQCIAMYDFKMGPNDEEGCLEFK------KSTVIQVMRRVDHNW 235
            |..::..|  :|:     :|:.:|......::     |.|.:..      ...:.::..|..|.:
  Fly  1615 AKDRKALF--SYI-----VPVHECSERLLTEL-----EACWQDNIMLLGLSRCIYEIAERHFHVY 1667

  Fly   236 A-----EGRIGQTIGIFPIAFVELNAAAKKLLDS--------------------GLHTHPFCHPP 275
            .     :||:.:|:              ::|.:|                    ||:.|.|...|
  Fly  1668 VAFCEHQGRMDRTL--------------RRLKESKESLAFQQHLERLEASPSCCGLNLHSFLMLP 1718

  Fly   276 KQQGQRALPPVPVIDPTVVTESSS-------------GSSNSTPGSSNSSSTSSSNNCSPNHQIS 327
            .|:..|    :|::...|.::.|.             .......|..|.::..............
  Fly  1719 MQRITR----LPLLIDAVFSKESPLNREEYESWKLTLALVQKVVGQCNEAANRWEQAFELERIAR 1779

  Fly   328 LPNTPQHVVASGSASVRFRDKGAKE----KRHSLNALL--GGGAPLS------------------ 368
            ....|.||.|...|.|.....|||.    ||..|..||  |..|.|:                  
  Fly  1780 QLEFPSHVRALAIAPVGVPRAGAKPRFLVKRGELTHLLWRGEDAKLTFGKRLTKISIYAFLFSDL 1844

  Fly   369 LLQTNRHSAEILSL----PHELSRLEVSSSTALKPTS--APQTSRVL----------KTTVQ--- 414
            ||...|......|:    |..:..|....|....||.  ..|..:.|          :.||:   
  Fly  1845 LLLCKRRGESCFSVFDYCPRSMLTLAAGDSLPQLPTKDLKDQAGKNLILMTLLENCDRKTVELVL 1909

  Fly   415 ------------QQMQP---NLP-------WG---YLALFPYKPRQTDELELKKGCVYIVTERCV 454
                        |.|:|   ..|       |.   .:|...|:..:.|.|:|:.|.|..|:.:..
  Fly  1910 SCPSVSDQQRWLQAMRPPEAETPGEKLYESWDCPQVVAKHSYESDEPDVLQLELGDVVNVSRKLP 1974

  Fly   455 DGWFKGKNWLD-ITGVFPGNYLTPL-----RARDQQQ 485
            |||::|:...| ..|.|||:|...|     |||:.:|
  Fly  1975 DGWYQGERIRDGAVGWFPGSYTEELNSAHVRARNLKQ 2011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RAD18 6..>113 CDD:227719 12/44 (27%)
RING-HC_SH3RF3 8..53 CDD:438408
SH3 139..191 CDD:473055 13/55 (24%)
SH3_SH3RF_2 199..251 CDD:212721 8/62 (13%)
SH3_SH3RF_3 424..477 CDD:212717 18/56 (32%)
SH3_SH3RF_C 782..836 CDD:212719
ExnNP_001097630.2 RhoGEF 1581..1762 CDD:459876 35/213 (16%)
PH_ephexin 1805..1931 CDD:269929 24/125 (19%)
SH3_ephexin1_like 1944..1998 CDD:212727 18/53 (34%)
Blue background indicates that the domain is not in the aligned region.

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