DRSC/TRiP Functional Genomics Resources

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Protein Alignment POSH and Dlish

DIOPT Version :10

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_611251.2 Gene:Dlish / 37014 FlyBaseID:FBgn0034264 Length:355 Species:Drosophila melanogaster


Alignment Length:96 Identity:23/96 - (23%)
Similarity:33/96 - (34%) Gaps:33/96 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSYGKDKVIFATAEDHATPSKV------ELPESEPRPGLILENGD--------INWNCPCLGGMA 55
            |.:|:    |:.|:::..||.|      :.|:|.|....:....|        ..:.....||.|
  Fly  1532 KPFGE----FSFAKNYTPPSVVGTKAGAKGPDSTPTSSTVQSGTDAKPSPFASFTFKAQTPGGSA 1592

  Fly    56 IGPCGNEFREA---------------FSCFH 71
            ..|.||.|..|               |||.|
  Fly  1593 SSPFGNIFGGAGVVAGAPSLGFEERDFSCAH 1623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RAD18 6..>113 CDD:227719 22/95 (23%)
RING-HC_SH3RF3 8..53 CDD:438408 10/58 (17%)
SH3 139..191 CDD:473055
SH3_SH3RF_2 199..251 CDD:212721
SH3_SH3RF_3 424..477 CDD:212717
SH3_SH3RF_C 782..836 CDD:212719
DlishNP_611251.2 SH3 61..111 CDD:212690
SH3 184..238 CDD:214620
SH3 293..346 CDD:212690
Blue background indicates that the domain is not in the aligned region.

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