DRSC/TRiP Functional Genomics Resources

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Protein Alignment POSH and C36B1.9

DIOPT Version :9

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_492366.1 Gene:C36B1.9 / 183252 WormBaseID:WBGene00007976 Length:674 Species:Caenorhabditis elegans


Alignment Length:765 Identity:139/765 - (18%)
Similarity:237/765 - (30%) Gaps:297/765 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NDLLECSVCLERLDTTS---KVLPCQHTFCRKCL------QDIVASQHKLRCPECRILVSCKIDE 62
            :::..|.||.:...::|   :||.|.||||.:|:      .:..:.:..::|||||     ||:|
 Worm    58 DNVQSCRVCYDEYHSSSNQARVLQCGHTFCTRCVVGCSSTMNNTSEEFGIKCPECR-----KINE 117

  Fly    63 -----LPPNVLLMRILEGMKQNAAAGKGEEKGEETETQPERAKPQPPAESVAP------------ 110
                 :|.|..||:||                  |.....:....||.:...|            
 Worm   118 QVPATVPINFQLMQIL------------------TTLSLVKVLQTPPQDQEIPKYENFERLGTEI 164

  Fly   111 PDNQLLQLQSHQQSHQPARHKQRRFLLPHAYALFDFASGEATDLKFKKGDLILIKHRIDNNWFVG 175
            |...|:.|...:             |..|..|:|:     |..|:.|:.                
 Worm   165 PIADLVNLTMGE-------------LYEHLKAVFN-----AIRLRGKRD---------------- 195

  Fly   176 QANGQEGTFPINYVKVSVPLPMPQCIAMYDFKMGPNDEEGCLEFKK-STVIQVMRRVDHNWAEGR 239
                          |.|:   .|..:..||           .|||| ..|.:.|.||.||..:.:
 Worm   196 --------------KTSI---RPSVVHRYD-----------SEFKKIDEVERSMNRVLHNVIKLQ 232

  Fly   240 IGQTI----GIFPIAFVELNAAAKKLLD---------------SG-LHTHPFCHPPKQQGQRALP 284
            .|:|:    ....|.:.:|:...::.|.               || :...|...||:...|   |
 Worm   233 SGETLPRPAPTITIPYWQLDREYRRSLQDNDWMREMVVFRPPTSGPVPVRPLVAPPQPPAQ---P 294

  Fly   285 PVPVIDPTVVTESSSGSSNSTPGSSNSSSTSSSNNCSPNHQISLPNTPQHVVASGSASVRFRDKG 349
            ||..:| ||:....:..:.:.|                         .:|:.|...|.:|...:.
 Worm   295 PVQDVD-TVLEREQAARAEADP-------------------------RRHLNAVREAHLRRERES 333

  Fly   350 AKEKRHSL-----------------NALLGGGAPLSLL--------------------------- 370
            |:|:..::                 |..:....|.||.                           
 Worm   334 AQEREAAVRNEQLMRQLLDRNENMQNVHIDRNDPFSLFRHLQRQEERDLEMHLRFRRTLDQDRDR 398

  Fly   371 QTNRHSAEILSLPHELSRLEVSSSTALKPTSAPQTSRVLKTTVQQQMQPNLPWG-----YLALFP 430
            ::.|..|:  .||..|...:|........:.|...|..:...|::...|.:..|     |..:..
 Worm   399 ESMRRVAD--GLPPILDHDDVDVEEDDDESVASDNSSFVDEPVERPPPPRMTLGEAVTIYRMIEV 461

  Fly   431 YKPRQTDELELKKGCVYIVTERCVDGWFKGKNWLDITGVF----PGNYLTPLRARDQQQLMHQWK 491
            :.||     ..:.|         .|.:....|..::..::    |.|  :|:...|..       
 Worm   462 FSPR-----HFRHG---------PDSFSLPHNHANLNSLYRELLPPN--SPITITDTM------- 503

  Fly   492 YVPQNADAQMAQVQQHPVAPDVRLNNMLS-------------MQPPDLPPRQQQATATTTSCSVW 543
                 :|:|:|.::::..|.:|..:.:|.             ::.|.|..|:::.          
 Worm   504 -----SDSQLADLRRYSQANNVDCDRLLRVLRHHSIKFAPTIVESPRLTERRRRR---------- 553

  Fly   544 SKPVEA---------LFSRKSEP----KPETATASTTSSSSSGAVGLMRRLTH-MKTRSK----- 589
            .:||.|         :..|..|.    :||   ..|....|:..:.|:..|.: |..|.|     
 Worm   554 QRPVPADDYNAHLSVIRKRAKEALRGNRPE---QPTNGEESNLTIRLIVNLANSMGVREKLDDVI 615

  Fly   590 SPGASLQQVPKEAISTNVEFTTNPSAKLHPVHVRSGSCP----SQLQHSQ 635
            .|....|:..||.....    ||.|.:...:......|.    |:..|||
 Worm   616 CPQHRAQEEEKEMFVPR----TNGSTRQEMLFCNVCRCEVPMGSKAVHSQ 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RING 11..53 CDD:238093 15/50 (30%)
SH3 139..191 CDD:302595 6/51 (12%)
SH3_SH3RF_2 199..251 CDD:212721 15/56 (27%)
SH3_SH3RF_3 424..477 CDD:212717 9/61 (15%)
SH3_SH3RF_C 782..836 CDD:212719
C36B1.9NP_492366.1 RAD18 58..>259 CDD:227719 59/285 (21%)
RING_Ubox 62..113 CDD:388418 15/50 (30%)
RING-HC finger (C3HC4-type) 63..112 CDD:319361 14/48 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4993
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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