DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POSH and sh3rf2

DIOPT Version :9

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:XP_031754675.1 Gene:sh3rf2 / 100497897 XenbaseID:XB-GENE-5763588 Length:732 Species:Xenopus tropicalis


Alignment Length:843 Identity:211/843 - (25%)
Similarity:338/843 - (40%) Gaps:169/843 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDEHTLNDLLECSVCLERLDTTSKVLPCQHTFCRKCLQDIVASQHKLRCPECRILVSCKIDELPP 65
            |||..:.|||:|.:||.:||..:||||||||||:.|||.:..::.:|:|||||..|.|.|:|||.
 Frog     1 MDELVVLDLLDCPLCLGKLDVNAKVLPCQHTFCQPCLQRLFKAKKELKCPECRTPVQCSIEELPA 65

  Fly    66 NVLLMRILEG-------MKQNAAAGKGEEKGEET--ETQPERAKPQPPAESVA----PPDNQLLQ 117
            |:||:|||:|       :::|::...|....:::  :::..||.....:.:::    |.|.|   
 Frog    66 NLLLVRILDGLRGGQTLLRRNSSRRMGGLFAQDSLKKSKANRASQDSTSRTISKARMPVDGQ--- 127

  Fly   118 LQSHQQSHQPARHKQRRFLLPHAYALFDFASGEATDLKFKKGDLILIKHRIDNNWFVGQANGQEG 182
                                ....||..:......||...|||:|::..::|.||..||||....
 Frog   128 --------------------SFFKALTTYRGNSPRDLTLNKGDIIVLHRQLDENWNNGQANRGSR 172

  Fly   183 TFPINYVKVSVPLPMPQCIAMYDFKMGPNDEEG--CLEFKKSTVIQVMRRVDHNWAEGRIGQTIG 245
            .||....|.....| ..|.|||:|.:...:.|.  ||:|:|..||.|:||||.|||||::|..:|
 Frog   173 IFPETSGKFLQQAP-ALCKAMYNFDVKEKNRESKDCLKFQKDDVISVIRRVDENWAEGKLGDQVG 236

  Fly   246 IFPIAFVELNAAAKKLLDSGLHTHPFCHPPKQQGQRALPP---VP-VIDPTVVTESSSGSSNSTP 306
            |||:.|||.|..||:||:|..:        :.....||.|   || .:..|.|..:.:.......
 Frog   237 IFPLMFVEPNQTAKQLLESKKN--------RSNHNNALYPLIKVPSKVKGTEVAPNHTMQEGRRK 293

  Fly   307 GSSNSSSTSSSNNCSPNHQISLPNTPQHVVASGSASVRFRDKGAKEKRHSLNALLGGGAPLSLLQ 371
            |......|::.|..  |..:..|...|....|....:...:....||..:|::     :|..|..
 Frog   294 GPRQFLITNALNRF--NKMVHSPTGRQTPEISSPILISSSNPAVIEKAEALSS-----SPAQLNT 351

  Fly   372 TNRHSAEILSLPHELSRLEVSSSTALKPTSAPQTSRVLKTTVQQQMQPNLPWGYLALFPYKPRQT 436
            :|.:                       ||...|::......:....|..|....:.|.||.....
 Frog   352 SNYY-----------------------PTFGTQSNGTPFMALPSSHQTILANMCVVLHPYMANGP 393

  Fly   437 DELELKKGCVYIVTERCVDGWFKGKNWLDIT---GVFPGNYLTPLRARDQQQLMHQWKYVPQNAD 498
            :|::|::|....:..:..:||.:|.:.  :|   |:||.:.::|:..:......|:   |..|:.
 Frog   394 EEMDLQRGEGVRILGKFQEGWLRGVSL--VTGKIGLFPSHCVSPVYRKSSNYSDHR---VSANST 453

  Fly   499 AQMAQVQQHPVAPDVRLNNMLSMQPPDLPPRQQQATATTTSCSVWSKPVEALFSRKSEPKPETAT 563
            ..:                                 :::.|.|......|..|:|...|...||.
 Frog   454 KWI---------------------------------SSSASVSSQGSMSENGFTRPVRPFVPTAV 485

  Fly   564 ASTTSSSSSGAV-------GLMRRLTHMKTRSKSPGASLQQV----PKEAI--STNVEFTTNPSA 615
            ......|...||       .::|:.:.::..|:|..|:|...    |..||  |..::...|.|.
 Frog   486 VEPMKQSMPSAVVTLRRNSNILRKCSTLQRNSQSNSAALPMTPINRPSSAIIQSQPIQIIYNASQ 550

  Fly   616 KLHPVHVRSGSCPSQLQHSQPLNETPAAKTAAQQQQFLPKQLPSASTNSVSYGS-QRVKGSKERP 679
            .  .|...:.:||........|:....||   ..:::.........||..|..| |.||.....|
 Frog   551 S--NVGASAENCPRPQSAYDTLSSGGRAK---DYRRYSTASYVFIETNESSAKSDQAVKSPSSGP 610

  Fly   680 HLICAR----QSLDAATFRSMYNNAASPPPPTTSVAPAVYAGGQQQVIP--GGGA----QSQLHA 734
            ..|..:    :|......:::.....||||.....:...:....:|::.  .|.|    |.|...
 Frog   611 PSILVKPDTPKSASDKQVKTVRFLNFSPPPLKRQGSQIQHISRNEQLLTEVEGNAEISNQQQRAI 675

  Fly   735 NMIIAPSH------RKSHSLDASHVLSPSSNMITEAAIKASATTKSPYCTRESRFRCIVPYPP 791
            ::.|.|:.      :||.|.|   ::.|.|..|      :.|:.:.|   .|||.|....|.|
 Frog   676 SITIKPTENRRMYKQKSSSSD---IVVPKSPAI------SVASKRGP---NESRKRWSAAYYP 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RING 11..53 CDD:238093 22/41 (54%)
SH3 139..191 CDD:302595 17/51 (33%)
SH3_SH3RF_2 199..251 CDD:212721 27/53 (51%)
SH3_SH3RF_3 424..477 CDD:212717 13/55 (24%)
SH3_SH3RF_C 782..836 CDD:212719 4/10 (40%)
sh3rf2XP_031754675.1 RING_Ubox 17..55 CDD:418438 21/37 (57%)
SH3 131..178 CDD:418401 17/46 (37%)
SH3 188..243 CDD:418401 27/54 (50%)
SH3_SH3RF2_3 381..435 CDD:212718 13/55 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D151303at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14167
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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