Protein Alignment Ns2 and AtNug2

DIOPT Version :10

• Sequence 1: NP_611232.1
• Gene: Ns2 / 36989
• FlyBaseID: FBgn0034243
• Length: 674
• Species: Drosophila melanogaster
• Sequence 2: NP_175706.1
• Gene: AtNug2 / 841731
• AraportID: AT1G52980
• Length: 576
• Species: Arabidopsis thaliana
• Alignment Length: 596
• Identity: 254/596 - (42%)
• Similarity: 365/596 - (61%)
• Gaps: 56/596 - (9%)

  Fly     3 KVRSTPGKPRTQGFNHSNHSMNPERPKSGLKGVAHPRTKGTIKRLQMYRNFKAKRDRTGKILTPA 67
            |..:..|||:        ||::..| ..|.|.....|:|.|:.||:||:. :.||:..||||:..
plant     6 KKANVSGKPK--------HSLDANR-ADGKKKTTETRSKSTVNRLKMYKT-RPKRNAGGKILSNE 60

  Fly    68 PFQGRLPAGTMARVEPTPKWFSNSRVISQTALQKFQDEIGKAVKDPYQVIMKPSQLPVTLLNEAA 132
            .....||   .:|:.|..:||.|:||::|..|:.|::|:...:...|.||:|..:||::||.:..
plant    61 YQSKELP---NSRIAPDRRWFGNTRVVNQKELEYFREELQTKMSSNYNVILKERKLPMSLLTDNK 122

  Fly   133 KYKRVHLLDTESFDSTFGPKKQRKRVSLKVRDLEDLSKAADDQADKYDSAKDL----DLIREDTG 193
            |..||||||.|.|...||.|.:|||..|...|.|.|.|.|.:..|.::.....    :...|:.|
plant   123 KQSRVHLLDMEPFQDAFGRKTKRKRPKLVASDYEALVKKAAESQDAFEEKNGAGPSGEGGEEEDG 187

  Fly   194 EKKAVRDWVFGAGQSKRIWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFI 258
            .:..||..:|..|||||||.||:||:|:|||::||:|||||.|||..::|:.|::...|||:..:
plant   188 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILL 252

  Fly   259 LNKVDLVPVWVTQRWVAILSAEYPTIAFHASLQHPFGKGALINLFRQLGKLHLDKKQISVGFIGY 323
            |||.||||.|.|:.|:.:||.||||:|||||:...||||:|:::.||..:|..||:.|||||:||
plant   253 LNKCDLVPAWATKGWLRVLSKEYPTLAFHASVNKSFGKGSLLSVLRQFARLKSDKQAISVGFVGY 317

  Fly   324 PNVGKSSVINALRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYPTAETDTEKVLKGVVR 388
            ||||||||||.||:|.|||||||.|||||||||||.|||||||||||||.:.:|:|:.|||||||
plant   318 PNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQSRDTETDIVLKGVVR 382

  Fly   389 VELVTNPEDYVDSLLKRVRPEYISKNYKIEHWNTSTHFLEQLAQKTGKLLKGGEPDVTVTARMVL 453
            |..:.:..:::..:|:||:.|::.:.|||:.|.....||.||.:.:||||||||||:...|:|:|
plant   383 VTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWEDDHDFLLQLCKSSGKLLKGGEPDLMTGAKMIL 447

  Fly   454 NDWQRGKLPFYVPPEGFAVPKSQE----------GKEEEVVAEDPNEDAKSEAPTFVSESVKKAR 508
            :|||||::||:|||     ||...          |.::|.:|::....|..:|...:. |.::.:
plant   448 HDWQRGRIPFFVPP-----PKLDNVASESEVIVPGIDKEAIADNSQAAAALKAIAGIM-STQQQK 506

  Fly   509 EFKQIQDFRKIRVGLEYEQEDVKDLDHIDLELLEQQKAERAAKKKARIHNLGEEDEE--SSDGAD 571
            :....:||        |:::|:||          .:||:.:.:..|......||||:  |.||.:
plant   507 DVPVQRDF--------YDEKDLKD----------DKKAKESTETDAENGTDAEEDEDAVSEDGVE 553

  Fly   572 EFYSEDEYNED 582
               |:.:.:||
plant   554 ---SDSDADED 561

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns2	NP_611232.1	NGP1NT	49..179	CDD:462379	51/129 (40%)
		NGP_1	214..370	CDD:206751	101/155 (65%)
		PTZ00121	<474..657	CDD:173412	26/121 (21%)
AtNug2	NP_175706.1	NGP1NT	43..169	CDD:462379	51/129 (40%)
		NGP_1	208..364	CDD:206751	101/155 (65%)
		MSCRAMM_ClfA	<479..>574	CDD:468110	24/105 (23%)