DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns2 and AT2G41670

DIOPT Version :10

Sequence 1:NP_611232.1 Gene:Ns2 / 36989 FlyBaseID:FBgn0034243 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_850353.1 Gene:AT2G41670 / 818765 AraportID:AT2G41670 Length:386 Species:Arabidopsis thaliana


Alignment Length:467 Identity:102/467 - (21%)
Similarity:172/467 - (36%) Gaps:145/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 DWVFG--AGQSKRIWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFILNKV 262
            :|..|  |..::.|.|.|    ..||::::|.|||.|:.:.:    |.|:.:...|.....|||.
plant    27 NWFPGHMAAATRAIRNRL----KLSDLVIEVRDARIPLSSAN----EDLQSQMSAKRRIIALNKK 83

  Fly   263 DLVPVWVTQRWVA-ILSAEYPTIAFHASLQHPFGKGALINLFR-QLGKLHLDKKQISVGFIGYPN 325
            ||....|..:|.. ..|::...||.:|..:....|  |::|.. :|.::...:..:.|..:|.||
plant    84 DLANPNVLNKWTRHFESSKQDCIAINAHSRSSVMK--LLDLVELKLKEVIAREPTLLVMVVGVPN 146

  Fly   326 VGKSSVINALRS-----------KKVCKVAPIAGETKVWQYITLMKR--IFLIDCPGVVYPT--- 374
            ||||::||::..           .|...|.|:.|.|:......:..|  |:::|.|||:.|:   
plant   147 VGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGFKIAHRPSIYVLDSPGVLVPSIPD 211

  Fly   375 AETDTEKVLKGVVRVELVTNPEDYVDSLLKRVR-PEYISKNYKIE----HWNTSTHFLEQLAQKT 434
            .||..:..|.|.|:           ||::...| .:|......|.    ||              
plant   212 IETGLKLALSGSVK-----------DSVVGEERIAQYFLAILNIRGTPLHW-------------- 251

  Fly   435 GKLLKGGEPDVTVTARMVLNDWQRGKLPFYVPPEGFAVPKSQEGKEEEVVAEDPNEDAKSEAPTF 499
             |.|..|                                          :.|.|:.|. .:.|::
plant   252 -KYLVEG------------------------------------------INEGPHADC-IDKPSY 272

  Fly   500 VSESVKKAREFKQIQDFRKIRVGLEYEQEDVKDLDHIDLELLEQQKAERAAKKKARIHNLGEEDE 564
                        .::|.|..|.    :|.|...|.::...:.|.|        ::....|.|.|.
plant   273 ------------NLKDLRHQRT----KQPDSSALHYVGDMISEVQ--------RSLYITLSEFDG 313

  Fly   565 ESSDGAD-EFYSEDEYNEDLQ---RVVHKKAK-----SKKPQQLAITSSGKFRVAKIQPGDSDGA 620
            ::.|..| |...|.:: |.||   ::.||.::     |||...|       ||..::.|...|..
plant   314 DTEDENDLECLIEQQF-EVLQKALKIPHKASEARLMVSKKFLTL-------FRTGRLGPFILDDV 370

  Fly   621 GSSDDDGPSTSK 632
            ..::.|.|::.:
plant   371 PETETDHPNSKR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns2NP_611232.1 NGP1NT 49..179 CDD:462379
NGP_1 214..370 CDD:206751 45/170 (26%)
PTZ00121 <474..657 CDD:173412 34/168 (20%)
AT2G41670NP_850353.1 YlqF 28..205 CDD:206749 51/186 (27%)
Blue background indicates that the domain is not in the aligned region.

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