DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns2 and LSG1

DIOPT Version :10

Sequence 1:NP_611232.1 Gene:Ns2 / 36989 FlyBaseID:FBgn0034243 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_060855.2 Gene:LSG1 / 55341 HGNCID:25652 Length:658 Species:Homo sapiens


Alignment Length:633 Identity:123/633 - (19%)
Similarity:221/633 - (34%) Gaps:203/633 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RLPA-GTMARV------------EPTPKWFSNSR--------------VISQTALQKFQDEIGKA 109
            |.|| |::.|.            ..|..|...|.              |..|::|..|......|
Human     5 RAPAGGSLGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELA 69

  Fly   110 ----VKDPYQVIMKPSQLPVTLLN--EAAKYKRVHLLDTESFDSTFGPKKQRKRVSLKVRDLEDL 168
                |.:...:...|::....||:  |:.:.|::|   .|:......|::.....:....:|:  
Human    70 GTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLH---EENKQFLCIPRRPNWNQNTTPEELK-- 129

  Fly   169 SKAADDQADKYDSAKD--LDLIREDTGEKKAVRDWVFGAGQSKRIWNELHKVVDASDVLLQVLDA 231
                  ||:| |:..:  ..|:|.:..:|..:..:    .::...|.:|.:|::.||:::|::||
Human   130 ------QAEK-DNFLEWRRQLVRLEEEQKLILTPF----ERNLDFWRQLWRVIERSDIVVQIVDA 183

  Fly   232 RDPMGTRSKYIEEFLRKEKPHKHLFFILNKVDLVPVWVTQRWVAILSAEYPTIAFHASL------ 290
            |:|:..|.:.:|.::::...:|....::||.||:.......|......|...:.|.::|      
Human   184 RNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWSALAGAIPL 248

  Fly   291 ----------------------------------------------------------------- 290
                                                                             
Human   249 NGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEE 313

  Fly   291 -----------------------------------------------QHPFGKGALINLFRQLGK 308
                                                           .|...|..|:.||::   
Human   314 EEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELLELFKE--- 375

  Fly   309 LHLDKK----QISVGFIGYPNVGKSSVINALRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 369
            ||..:|    |::||.:|||||||||.||.:...|...|:...|.||.:|.:.:...:.|.||||
Human   376 LHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPG 440

  Fly   370 VVYPT-AETDTEKVLKGVVRVELVTNPEDYVDSLLKRVRPEYISKNYKI-----------EHWNT 422
            :|.|: ..|..|....|::.::.:.:....|..:.:.:....:...|.|           ....|
Human   441 LVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPT 505

  Fly   423 STHFLEQLAQKTGKLLKGGEPDVTVTARMVLNDWQRGKLPFYVPPEGFAVPKSQEGKEEEVVAED 487
            |...|.......|.:...|:||...:||.:|.|:..|||.:..||.| ..|.:.:.:.:.::...
Human   506 SEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPPG-RDPVTFQHQHQRLLENK 569

  Fly   488 PNEDAKSEAPTFVSESVKKAREFKQIQD--FRKIRVGLEYEQEDVKDL 533
            .|.|   |....:..: |||::.:.|.|  |        :.||:|:.|
Human   570 MNSD---EIKMQLGRN-KKAKQIENIVDKTF--------FHQENVRAL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns2NP_611232.1 NGP1NT 49..179 CDD:462379 25/139 (18%)
NGP_1 214..370 CDD:206751 52/277 (19%)
PTZ00121 <474..657 CDD:173412 13/62 (21%)
LSG1NP_060855.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 5/25 (20%)
HSR1_MMR1 163..444 CDD:206750 55/283 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..355 0/104 (0%)
RbgA <367..544 CDD:440775 51/179 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 623..658
Blue background indicates that the domain is not in the aligned region.

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