DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns2 and LOC1279694

DIOPT Version :10

Sequence 1:NP_611232.1 Gene:Ns2 / 36989 FlyBaseID:FBgn0034243 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_319462.5 Gene:LOC1279694 / 1279694 VectorBaseID:AGAMI1_002582 Length:697 Species:Anopheles gambiae


Alignment Length:194 Identity:43/194 - (22%)
Similarity:73/194 - (37%) Gaps:49/194 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 IEEFLRKEKPHKHLFFILNKVDLVP---VWVTQRWVAILSAEYPTIAF------HASL---QHPF 294
            :.|.|..::|   :..:.|||||:|   ....:.....|:.......|      |.||   ...:
Mosquito   281 LSEILGVQRP---IIVVGNKVDLLPQDSAGYLENVRQCLTRSVIESGFSRNNIKHVSLISASTGY 342

  Fly   295 GKGALI----NLFRQLGKLHLDKKQISVGFIGYPNVGKSSVINALRSKKVCKVAPIAGETKVWQY 355
            |...||    |::...|.::|         :|..|||||::.|.|....:|||          |.
Mosquito   343 GVEELITKIHNVWGTRGDVYL---------VGCTNVGKSTLFNVLLRSDLCKV----------QA 388

  Fly   356 ITLMKRIFLIDCPGVV-----YPTAETDTEKVLKGVVRVELVTNPEDYVDSLLKRVRPEYISKN 414
            ..|:::......||..     :|.......::...:.|::    .|.|:....:::|.|  .||
Mosquito   389 TDLIQKATASPWPGTTIRMLKFPILRPSDHRLFLRMKRLQ----QERYIKQANEKLRRE--QKN 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns2NP_611232.1 NGP1NT 49..179 CDD:462379
NGP_1 214..370 CDD:206751 34/143 (24%)
PTZ00121 <474..657 CDD:173412
LOC1279694XP_319462.5 None
Blue background indicates that the domain is not in the aligned region.

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