DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14480 and Psme3ip1

DIOPT Version :10

Sequence 1:NP_611231.1 Gene:CG14480 / 36988 FlyBaseID:FBgn0034242 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001014036.1 Gene:Psme3ip1 / 307652 RGDID:1307433 Length:254 Species:Rattus norvegicus


Alignment Length:236 Identity:96/236 - (40%)
Similarity:141/236 - (59%) Gaps:33/236 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FVTEAEATEQRQRRQEEWERVRQPEDPLERPEEPYDGRSLYERLKQNKDKKDMEFEEAHKLKNLI 69
            ||:|||..|:|:|||||||:||:||||.|.|||.||.|||||||::.||:|..|:||..|.||::
  Rat    15 FVSEAELDERRKRRQEEWEKVRKPEDPEECPEEAYDPRSLYERLQEQKDRKQQEYEEQFKFKNMV 79

  Fly    70 RGLDDDEVQFLELVDAHKIHAERQQMRDEEL-ELKDFRNRVEKL----QEESVDKKLQAE-LKTT 128
            ||||:||..||:.|...:...|:|: |:||| |||::|:.:.|:    :.:.|:|||..: ::|.
  Rat    80 RGLDEDETNFLDEVSRQQELIEKQR-REEELEELKEYRSNLNKVGISAENKEVEKKLAVKPIETR 143

  Fly   129 AKSAGASVGRSTQKTLLGQGIKRKNGELPTTSKVAKITENEVEQTATNEATKDPADKTTNTTLIT 193
            :|        .:|..||...:|.|:.|          :.|.|::...:....|.|.:..:...:.
  Rat   144 SK--------FSQAKLLAGAVKHKSSE----------SGNSVKRLKPDPDPDDKAQEAPSCMSLG 190

  Fly   194 NKYNQG--------ALKCIAILPGIGSYTESSDSEASTDEE 226
            :....|        |..||.||||:|:|:.|||||:|:|.|
  Rat   191 SSSLSGAPSLHCPSAAVCIGILPGLGAYSGSSDSESSSDSE 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14480NP_611231.1 FAM192A_Fyv6_N 5..106 CDD:462987 60/101 (59%)
Psme3ip1NP_001014036.1 FAM192A_Fyv6_N 15..98 CDD:462987 51/82 (62%)

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