DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESR4 and bip2

DIOPT Version :9

Sequence 1:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_651923.2 Gene:bip2 / 43793 FlyBaseID:FBgn0026262 Length:1406 Species:Drosophila melanogaster


Alignment Length:1761 Identity:311/1761 - (17%)
Similarity:530/1761 - (30%) Gaps:626/1761 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LGANCLTTGSP---SKDLVK---QELVEDKSEELK-----EPT---------SISLNEQ----FL 181
            :|.:| |..:|   .:|:::   ||...|....::     ||.         ::|:|.|    ::
  Fly    22 IGYSC-TLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEPNLKDARLSIKNLSINVQELLDYI 85

  Fly   182 DDIELKTEVED-------KSDSL-------SET------HMEFLTDSEEQPSESLGANHESEIDE 226
            .::|....:.|       ||.::       :||      ..|:|...::.....:.|:.:.|..|
  Fly    86 GNVEPVGFIRDVPQFPIGKSVNMNFLKPGSAETLTRPVYIFEYLPPMQDPELREIPADVQKEFSE 150

  Fly   227 KVDHFQPKESDSNEVEDKYFQSANEDSESEIEETVYTPPVINLETDS---ESGDKEFISIKDNES 288
            |.:.....|..|....|| ..:.:.||       :....|||..:::   :.|.    |:::..|
  Fly   151 KQEFCSKAEYSSTNAADK-LGAKHIDS-------ISPNTVINFRSNAFELDVGS----SVREMSS 203

  Fly   289 PVLEIEGGTEKSQTSGDLYQADVGEYASTAPPEV-------DETTSQTIGVPSLEGSDTLDSPSL 346
            .|:         .|.|.:..|..|:......|::       |...|.||.|.||:     .||.|
  Fly   204 VVM---------TTGGFISPAIEGKLPEDIIPDIVEKFLGLDAPFSPTIIVNSLQ-----KSPQL 254

  Fly   347 TM-DVDLPCSEDGAPPNVIKI---ESDMEDEAHSDSVKL---KEHTVEVVPLIKLNGAHKALKEE 404
            .: |.|...:.....|:..||   .:.:....||:|..:   ..||:..|...|.|  .|...:.
  Fly   255 ALSDRDKTVNPRKIIPSETKIFKQNAALLTSGHSESSIIYASNNHTMLTVTTPKKN--RKQKHDL 317

  Fly   405 KLEDGEVEEVEDPGEELEDPKEQSVITNHTGNNTKEEDTTASQVSALPLILPVGTTRSRSISSRS 469
            ..|.|:.|.:.:|.|:.::..::..:..:...:..:.|::.:|:..:        .:.:...:|.
  Fly   318 ICEPGQSELLTNPFEKAQEKSQRKALKMYKQTSKNQRDSSINQIQNM--------KKLKKKFNRG 374

  Fly   470 STVSSASQPHLVIDHPESEHNAKPPALKLSLKRRRSKSSSVSQPEKQTKVEAGGFVSSLLLQRLQ 534
            |.            .|..:|          |::...|.|.:.|.:.|..::...|     ||..|
  Fly   375 SF------------DPNKKH----------LEKIFKKQSKLKQNDLQLDIDEKHF-----LQNSQ 412

  Fly   535 SNSNVIPPAISTESQQVLSCAKCNLQFDFERFQELNKHQAQCSGIQSANSSQLSQKQERFFRCSQ 599
            :.|.:...|.|.|                      |..||.........:||:    |..||   
  Fly   413 TTSGLAIKANSNE----------------------NALQADIPSQPPTVTSQI----ENNFR--- 448

  Fly   600 CCSVHQCWHFFLHMREVHRRYICLYCNHVYPSVEKLSLHLENKHDIDQSHFAKDAWDQQQSKEDR 664
                                      |.:||                                  
  Fly   449 --------------------------NSIYP---------------------------------- 453

  Fly   665 ARHLVCCTCQATFVQGSEFEDHDCSQLMQPCALCNQKGGHIIGCKNNKRKPTKRR----RKVRRP 725
                                       :||..:  |:...::..|.:..:|.:.:    :|:.:|
  Fly   454 ---------------------------VQPSVI--QQTQVLLAEKKSGSEPERSKLDIFKKISKP 489

  Fly   726 PEPPLPVSQEAVEQPVPVEAIPEQLPQQLHLQSDIQNPFPAENIPAPEPVEDPPAPPI----PKL 786
            ..|...:....|.....|......:.             |:..|..|......|.|.:    ...
  Fly   490 RTPRPDIGATLVPPGTGVSVFGSTMT-------------PSALISLPSGTTITPTPSLGLNSENK 541

  Fly   787 VVPKIMLRVPKEFQKSVDAALSSTDTEDEELETAQPVEEAVSAPPEDLPFDAPPPPPPALSYDDS 851
            .||.:.:.....|..::..             |...||.::        .|:|.|..........
  Fly   542 NVPSMKINPCNIFDGTIPL-------------TKAGVEMSI--------IDSPKPKKRGRKPGGK 585

  Fly   852 TSSKLNRVLAELERTKLDIERTKADIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRRW 916
            ...|...|:::....|  :||.|:.                     |.:..|....|....|...
  Fly   586 NVIKQTNVVSQPLINK--VERKKSS---------------------QAITLPLSSSPMIITQSSL 627

  Fly   917 SLTPPASPHNNHVNLPEPPPALITEF--QGQPDAVRRNSLGSDCMDMDDSLNAPEMEGSRDFTEA 979
            :::||..| .|..|..:|....::..  :.:.|..:..||..:.|.:|.|. :||.      ...
  Fly   628 NVSPPTEP-LNLCNTEQPSNNFLSNLYAKEKKDRKKYKSLPENVMQLDKSC-SPEK------AST 684

  Fly   980 QKETLEPAPPSQDTQTADEPLAIQ--------------------PL---PPADGIMVAGPDTHTV 1021
            ...::.|...:.|.|.:|:.:.|.                    ||   ||..|::..||.    
  Fly   685 LHNSIRPTKQNNDVQCSDKFVTISNALSNASIYPGIQTGMVPLLPLLQFPPRPGLIPTGPG---- 745

  Fly  1022 DLQLDRPLDRFSMVDFVRLCLKSVYSLCLYCNHARRIAVNVKQLVIHLIGQHRFTATVDSITAEE 1086
                               ...:|..|..:.||..||.:               :..:|....||
  Fly   746 -------------------LFPAVTGLVGFGNHGNRIPI---------------SPFIDYPGPEE 776

  Fly  1087 LYAETI---------VAKLKSFLP--------NLENEYMNAA---------------SCCS--LE 1117
            ..|:|:         |.....||.        .::..|.|.|               ||.|  ||
  Fly   777 SVADTVRCPPIKDSPVTDSDQFLSRSSTQTDLQMDRNYCNVAPLVPDSMKFAECKSVSCASTILE 841

  Fly  1118 N------------------GKYVEPFNERIYECFTCRFVTSTHKELYTHNRRLHIKSNITCVMCQ 1164
            |                  |...:|..            .|...:...|||::        |..:
  Fly   842 NPSAQATSKINTKPLLEASGNPDDPIE------------VSDDSDESMHNRQM--------VQRK 886

  Fly  1165 TNFYSYSEILCHICPGEVAGSVYDLQFRCCLCDMAPLPSAFRLMVHLRKQHQACDICLEDCQSQS 1229
            |...|         |..|..|..:|.           ||:|.......::....|:     ::..
  Fly   887 TPISS---------PTYVKTSFAELN-----------PSSFTSAASNGEEKSKMDL-----RNIV 926

  Fly  1230 KLSSHVWKHKLLHLCYRCGIAYRNKQDISKHLFWKHGTESAGCKQCLQKRWRHVYHFCVPPAEFP 1294
            .|||:....|...|.         ||.........|...|               |...|....|
  Fly   927 SLSSNEPLKKFKKLV---------KQSFPDVKSVPHTPAS---------------HSSFPQFNLP 967

  Fly  1295 CEQCGFVFSKAIYLEVHQRMHTGDFRYACTEEGCEEKFVSRKLLLKHASSHVAKELPQAVSVEQT 1359
            ....|..||.|...::.......|..|            |.|::   ..|.:...:|..:.:.:.
  Fly   968 NFMGGDKFSLAGGADLIPLSRVSDSEY------------SSKIV---PFSSLGGTIPNQIKISEE 1017

  Fly  1360 ADAAPT-EKLEDI---KEELEEGEDEKEGAHNQEKLLSESLTNNETPKKEESDRIDNSIEPPLSK 1420
            .:...| ...|||   ...|...|.:....|.:.|.:.|.....:..||::|.:.| .|..|..|
  Fly  1018 HNIFSTFSNYEDITITPTGLTSLEPKMRKHHKKLKKVKEGKNKKKKEKKDKSKKAD-QIGLPSFK 1081

  Fly  1421 SE-----NRKRRKKSKRNKESLEDLNLIAPNLSESDSSDDSDSDAP---RSSHQEQPKL-PMRSS 1476
            |:     |.||:||.|:..:..:.|..|..:..|.|....:::|.|   .||....|.| ...|.
  Fly  1082 SDRKIKANDKRQKKEKKKDKDKQILVHIPDDTEEFDKVPLANNDEPVLKSSSMTINPSLGAATSG 1146

  Fly  1477 VDDLDMPKVMLSPSSESDADELDGKSKLEDKEEKPLDGSTEEKALDADDELEPKKEEDQVDVSIW 1541
            :....:||:.|         :|.|||.|....||.:..:.:.|                      
  Fly  1147 ISPNQIPKLTL---------KLSGKSTLFSSSEKEMTDAGKLK---------------------- 1180

  Fly  1542 KNLLQNQAVAIPEEQAVKDEEREDS--------LVNLPPAK-----LHVAWSDHDYCKLYRTPAP 1593
                  |...:..|.  |..||::|        ||..||..     ||:..|....     .|.|
  Fly  1181 ------QTTILSSEN--KKRERDNSPELARFSPLVTGPPKNKQSETLHLGNSSTAV-----LPVP 1232

  Fly  1594 SPVKQKSANKSSIKTPGENAS--SDSDSSSSSSSSDSDSS-------------------SCSCGS 1637
            |||..::......:|...:|.  |:.::|:::||:.|.||                   ...|.|
  Fly  1233 SPVAVRAVQLPVSQTSSNSAGWLSNPNNSNTASSTLSASSVLLPQQLMLAPHTIMNNFVPAMCNS 1297

  Fly  1638 NCSCSSSNSSSSSGNSDDSDSSTARGSPQKRSRKKSLKVKKSSE-SLKIDQNGQN-----EQNQV 1696
            ..:.|.|...||..|:.:.:::             ::::.:||. |..:|..|..     ...:|
  Fly  1298 TGTVSKSGLCSSPPNTSEENAN-------------AMQIAESSRPSSYVDAEGNRIWICPACGKV 1349

  Fly  1697 EDTTAV 1702
            :|.:|:
  Fly  1350 DDGSAM 1355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368 1/15 (7%)
C2H2 Zn finger 1295..1315 CDD:275370 4/19 (21%)
C2H2 Zn finger 1323..1341 CDD:275370 2/17 (12%)
PHD_ING 2110..2156 CDD:276980
bip2NP_651923.2 BTP 4..80 CDD:128846 12/58 (21%)
PHD_TAF3 1342..1387 CDD:276997 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5034
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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