DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESR4 and CG12071

DIOPT Version :9

Sequence 1:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_651832.3 Gene:CG12071 / 43660 FlyBaseID:FBgn0039808 Length:581 Species:Drosophila melanogaster


Alignment Length:676 Identity:122/676 - (18%)
Similarity:226/676 - (33%) Gaps:187/676 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 AHKALKEEKLEDGEVEEVEDPGEELEDPKEQSVITNHTGNNTKEEDTTASQVSALPLILPVGTTR 461
            ||.|:::      ::.:.....::.:..::|:..|.:..||::.......|             :
  Fly    15 AHMAVQQ------QMAQAAIQFKQQQTSQQQNSPTANNNNNSQNNGNMQQQ-------------Q 60

  Fly   462 SRSISSRSSTVSSASQPHLVIDHPESEHNAKPPALKLS-LKRRRSKSSSVSQPEKQTKVEAGGFV 525
            .:....:........|.|...       ..|.|.:..| :....:..|:.:.|:.....|.|..|
  Fly    61 QQQQQQQQQQQQQQQQQHYAA-------TIKVPQISSSNVAAAAAGESTFTVPDDGMGFEGGVRV 118

  Fly   526 SSLL-----LQRLQSN---SNVIP---PAISTESQQVLSCAKCNLQFDFERFQELNKHQAQCSGI 579
            ...|     .::|..|   .|:||   |.:...|....|           |.:.|.:.|...||:
  Fly   119 LQSLGTWSAAEQLTYNIPKPNLIPFTEPYVEGGSMHPAS-----------RLKALQQVQQASSGV 172

  Fly   580 QSANSSQLSQKQERFFRCSQC-CSVHQCWHFFLHMREVH---RRYICLYCNHVYPSVEKLSLHLE 640
            :..|.|:.:.|.   |.|:.| ..:.:.....:||| :|   :.|||..||..:...:||.:|:.
  Fly   173 RKTNPSKSTNKA---FECTVCGKGLARKDKLTIHMR-IHTGEKPYICEVCNKAFARRDKLVIHMN 233

  Fly   641 NKHDIDQSHFAKDAWDQQQSKEDRARHLVCCTCQATFVQGSEFEDHDCSQLMQPCALCNQKGGHI 705
            ....:..::.|.                                                     
  Fly   234 KFKHVTPTNIAP----------------------------------------------------- 245

  Fly   706 IGCKNNKRKPTKRRRKVRRPPEPPLPVSQEAVEQPVPVEAIPEQLPQQLHLQSDIQN-PFPAENI 769
            :|.:.|...      |.:..|:||                 ||...|.|.||...|. ...|:||
  Fly   246 LGKRLNNMV------KKKEQPDPP-----------------PEDNKQSLELQLQQQAVQVAAQNI 287

  Fly   770 PAPEPVEDPPAPPIPKLVVPKIMLRVPKEFQKSVDAAL-----SSTDT----EDEELETAQPVEE 825
            ........|.:  ||.:::|.      .:.|.|....|     ||.|.    ....||..|    
  Fly   288 IVQSAQGAPTS--IPGIIIPH------HQQQLSWTCELCGRMFSSRDEWSIHAKSHLEYXQ---- 340

  Fly   826 AVSAPPEDLPFDAPPPPPPALSYDDSTSSKLN----RVLAELERTKLDIERTKADIITKKQSKII 886
                 ||.|..::..|...|......|:|..|    ::.|...:.:::.:..|..||.  |:::|
  Fly   341 -----PERLVAESTKPAAAAAGVIAKTTSSNNSRNYQMDANQNQIQMEAQARKQKIII--QNQMI 398

  Fly   887 MANAHLENVVPQVVDPPQHLQPQQEEQRRWSLTPPAS-PHNNHVNLPEPPPALITEFQGQPDAVR 950
            :..:|.:...||  ..||..|.||::|:..:....|: .|..|:...:..    .:.|.|....:
  Fly   399 LNASHQQQQQPQ--QHPQQQQHQQQQQQHVAHGKKAARKHQQHLQQQQQQ----QQQQQQQQQQQ 457

  Fly   951 RNSLGSDCMDMDDSLNAPEMEGSRDFTEAQKETLEPAPPS---QDTQTADEPLAIQ---PLPPAD 1009
            :....:...:.:.|.|......|::.:......:..:|.:   ...|.::....:|   |:...:
  Fly   458 QQQTSAPMYNNNSSSNHNGNNQSQEVSVPVSHIIANSPTAATYMQAQLSEHASNMQHGMPIVTYN 522

  Fly  1010 G----IMVAGPDTHTVDLQ-LDRPLD 1030
            |    ::...||   :|:: :.:|||
  Fly   523 GNQYCVITRAPD---LDVEAMQKPLD 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368
C2H2 Zn finger 1295..1315 CDD:275370
C2H2 Zn finger 1323..1341 CDD:275370
PHD_ING 2110..2156 CDD:276980
CG12071NP_651832.3 zf-C2H2 185..207 CDD:278523 6/22 (27%)
C2H2 Zn finger 187..207 CDD:275368 5/20 (25%)
zf-H2C2_2 200..224 CDD:290200 9/24 (38%)
C2H2 Zn finger 215..232 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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