DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MESR4 and ing3

DIOPT Version :9

Sequence 1:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_957231.1 Gene:ing3 / 393911 ZFINID:ZDB-GENE-040109-3 Length:416 Species:Danio rerio


Alignment Length:549 Identity:117/549 - (21%)
Similarity:166/549 - (30%) Gaps:239/549 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly  1680 SESLKIDQNGQNEQNQVEDTTAVNE-----NNNPVAPPSPKPPMYNE------SDFDTAFSDTDE 1733
            :|..::|...||..:|:|.  .|||     ..|       ||....|      .|:..|..|.||
Zfish    23 TEMREMDLQVQNAMDQLEQ--RVNEFFTNAKKN-------KPEWREEQMEIIKKDYYKALEDADE 78

  Fly  1734 ---------EFYDSHPQKLANELLTQKREALMAEHA---------------PMRPSNNYDI---- 1770
                     :..|.|.:||..||...|.| |.|::|               |.:|.||:.:    
Zfish    79 KVQLANQIYDLVDRHLRKLDQELAKFKME-LEADNAGITEILERRSLEMDSPSQPVNNHHVHSHT 142

  Fly  1771 -VENSRPSTPSLPEEASAFADKREKVRNKKKKRE-------------------RKSTCKSGKLQP 1815
             ||..:.|||:        ....|.|..||.|.|                   ..||..|..:..
Zfish   143 TVEKRKYSTPA--------HHTTEHVPEKKFKSEALLSTLTSDATKENTPGCRANSTSSSNSMYN 199

  Fly  1816 VAS----TTPPPMDRIPGMP----GMIAPLEPPTPILSHPESSLFPVTPLTHRQLQSSMTRMSEG 1872
            |.|    |:...:..:|..|    |.|:                     :...|...:..:|.||
Zfish   200 VNSSQSLTSSYNLSPLPAGPAAGAGAIS---------------------MAAAQAVQATAQMKEG 243

  Fly  1873 SSCSDADGQLKRSKRQRRPNKFYG--YTSDDEN---MSAVLAPPLQVGMQLIKPQPPPQLTWAKE 1932
            ...|    .||.|....:.|.|.|  :|...::   .|:.||..|          ..|..:....
Zfish   244 RRTS----SLKASYEAVKNNDFLGRDFTMSRDSSSYSSSALASTL----------TQPLTSTNSS 294

  Fly  1933 DLPTPPKQRNRNNNNSSHHHHSHSNGGMAGSSRKRSKQRSLFGAGGSRPAKRHKPDPNDHLPPIP 1997
            |..|  .::.::|..||:|..|.|:...:.||...|.            |..|:           
Zfish   295 DSRT--ARKTKSNTKSSNHQSSSSSSSSSLSSCSSSS------------ALAHE----------- 334

  Fly  1998 TLKIRPSLLPTTAPPSDSSESSSDDEEAEVNVTSVVPTPQPAPPPVLPTPLPVALPVPPPPPPAA 2062
                   |:.||...:|:|             :.|..|..|                        
Zfish   335 -------LVQTTVTETDTS-------------SQVDWTYDP------------------------ 355

  Fly  2063 TAFNQPIPPALLPNPGFATLQYFKANNIRYPIRPPAGARLAREGESVYCYCRCPYDEVSEMIACD 2127
               |:|                                          .||.|......||:.||
Zfish   356 ---NEP------------------------------------------RYCICNQVSYGEMVGCD 375

  Fly  2128 GDNCLIEWFHFECVGIMVAPQGKWFCAEC 2156
            ..:|.|||||:.|||:..||:|||:|.:|
Zfish   376 NQDCPIEWFHYGCVGLTEAPKGKWYCPQC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368
C2H2 Zn finger 1295..1315 CDD:275370
C2H2 Zn finger 1323..1341 CDD:275370
PHD_ING 2110..2156 CDD:276980 22/45 (49%)
ing3NP_957231.1 ING 3..102 CDD:289749 23/87 (26%)
TNG2 4..408 CDD:227367 117/549 (21%)
PHD_ING3 360..404 CDD:277060 22/43 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5034
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1434088at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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